This paper shows the first public and systematic dataset of flood episodes referring to the entire Pyrenees massif, at municipal scale, named PIRAGUA_flood. Of the 181 flood events (1981–2015) that produced 154 fatalities, 36 were transnational, with the eastern part of the massif most affected. Dominant weather types show a southern component flow, with a talweg on the Iberian Peninsula and a depression in the vicinity. A positive and significant trend was found in Nouvelle-Aquitaine.